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ftp            	Top level of PDB ftp tree approximately 130 GB ( /pub/pdb )
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ftp_derived    	Derived data directory within PDB ftp archive Approximately 120 MB ( /pub/pdb/derived_data )
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Using ftp protocol:

ftp ftp.wwpdb.org

will connect to an anonymous ftp server containing the remediated wwPDB repository.

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Download coordinate files in PDBML format:

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Using ftp protocol:

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Download coordinate files in PDBML format:

ftp://ftp.ebi.ac.uk/pub/databases/pdb/data/structures/divided/XML

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Download the full PDB ftp tree:

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PDBj:

Using rsync protocol:

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Welcome to PDBj FTP site.

ftp Top level of PDB data ftp tree approximately 145 GB ( /pub/pdb ) ftp_data Data directory within ftp archive approximately 144 GB ( /pub/pdb/data ) ftp_derived Derived data directory within ftp archive approximately 130 MB ( /pub/pdb/derived_data ) ftp_doc Doc directory within ftp archive approximately 331 MB ( /pub/pdb/doc ) emdb Top level of EMDB data ftp tree approximately 49 GB ( /pub/emdb ) rsync Top level of PDBj FTP tree approximately 423 GB ( / )

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rsync -rlpt -v -z --delete \
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rsync -rlpt -v -z --delete \
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rsync -rlpt -v -z --delete \
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Using ftp protocol:

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ftp://ftp.pdbj.org/pub/pdb/data/structures/divided/XML-noatom

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ftp://ftp.pdbj.org/pub/pdb/data/structures/divided/XML-extatom

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